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SAK-40892: Nested SqlService calls can lead to pool connection deadlock under certain conditions (#7842)

(cherry picked from commit 855296897ac5847126e92dd99917f3f89d531330)

SAK-40892: Nested SqlService calls can lead to pool connection deadlock under certain conditions (#7842)

SAK-40892: Nested SqlService calls can lead to pool connection deadlock under certain conditions (#7842)

(cherry picked from commit 855296897ac5847126e92dd99917f3f89d531330)

SAK-40374 UsageSession deprecated (getStart, getEnd) (#5838)

  1. … 3 more files in changeset.
SAK-40012 Remove the longDataSource (#5605)

This used to be used to separate file uploads/downloads from using all the connections in the pool, but it isn’t used any more and can be removed.

  1. … 1 more file in changeset.
SAK-31796 - Clean up instances of e.printStackTrace in the rest of Sakai (#5113)

* Search - Clean up instances of e.printStackTrace

* Sections - Clean up instances of printStackTrace

* Shortened - Clean up instances of e.printStackTrace

* SimpleRSS - Clean up instances of e.printStackTrace

* Site - Clean up instances of e.printStackTrace

* sitedescription - Clean up instances of e.printStackTrace

* Taggable - Clean up instances of e.printStackTrace

* Signup - Clean up instances of e.printStackTrace

* Sitemanage - Clean up instances of e.printStackTrace

* Access - Clean up instances of e.printStackTrace

* Admin-tools - Clean up instances of e.printStackTrace

* Announcement - Clean up instances of e.printStackTrace

* Archive - Clean up instances of e.printStackTrace

* Assignment - Clean up instances of e.printStackTrace

* Basiclti - Clean up instances of e.printStackTrace

* Calendar - Clean up instances of e.printStackTrace

* Chat - Clean up instances of e.printStackTrace

* Citations - Clean up instances of e.printStackTrace

* Cloud-content - Clean up instances of e.printStackTrace

* Cmprovider - Clean up instances of e.printStackTrace

* Common - Clean up instances of e.printStackTrace

* Sitestats - Clean up instances of e.printStackTrace

* Commons - Clean up instances of e.printStackTrace

* Content - Clean up instances of e.printStackTrace

* Courier - Clean up instances of e.printStackTrace

* Dav - Clean up instances of e.printStackTrace

* Delegatedaccess - Clean up instances of e.printStackTrace

* Edu-services - Clean up instances of e.printStackTrace

* Content-review - Clean up instances of e.printStackTrace

* Citations - Clean up instances of e.printStackTrace

* Emailtemplateservice - Clean up instances of e.printStackTrace

* Endorsed - Clean up instances of e.printStackTrace

* Entitybroker - Clean up instances of e.printStackTrace

* External-calendaring-service - Clean up instances of e.printStackTrace

* External-calendaring-service - Clean up instances of e.printStackTrace

* Feedback - Clean up instances of e.printStackTrace

* Syllabus - Clean up instances of e.printStackTrace

* Tags - Clean up instances of e.printStackTrace

* Gradebook - Clean up instances of printStackTrace

* Textarea - Clean up printStackTrace

* Tool - Clean up printStackTrace

* Gradebookng - Clean up instances of e.printStackTrace

* Help - Clean up instances of e.printStackTrace

* Hierarchy - Clean up instances of e.printStackTrace

* Jobsscheduler - Clean up instances of e.printStackTrace

* Jsf - Clean up instances of e.printStackTrace

* User - Clean up instances of printStackTrace

* useraudit - Clean up instances of printStack

* usermembership - Clean up instances of printStackTrace

* Velocity - Clean up instances of printStackTrace

* Web - Clean up instances of printStackTrace

* Webservices - Clean up instances of printStackTrace

* Rwiki - Clean up instances of printStackTrace

* rubrics - Clean up instances of printStackTrace

* rsf - Clean up instances of printStackTrace

* roster2 - Clean up instances of printStackTrace

* reset-pass - Clean up instances of printStackTrace

* providers - Clean up instances of printStackTrace

* Profile2 - Clean up instances of printStackTrace

* Kernel - Clean up instances of printStackTrace

* Presence - Clean up instances of printStackTrace

* Postem - Clean up instances of printStackTrace

* Portal - Clean up instances of printStackTrace

* polls - Clean up instances of printStackTrace

* Podcasts - Clean up instances of printStackTrace

* Pasystem - Clean up instances of printStackTrace

* oauth - Clean up instances of printStackTrace

* Lessonbuilder - Clean up instances of printStackTrace

* Login - Clean up instances of printStackTrace

* Mailarchive - Clean up instances of printStackTrace

* Mailsender - Clean up instances of printStackTrace

* Message - Clean up instances of printStackTrace

* MSGCNTR - Clean up instances of printStackTrace

* Extra cases - Clean up instances of printStackTrace

* Extra cases - Clean up instances of System.out.println

* Extra cases - Use Slf4j Annotation

(cherry picked from commit 1dc2b84ba355b8be8a1262fd2572b1a3bfd3900c)

    • -188
    • +184
    ./impl/BasicSqlService.java
  1. … 1309 more files in changeset.
SAK-31796 - Clean up instances of e.printStackTrace in the rest of Sakai (#5113)

* Search - Clean up instances of e.printStackTrace

* Sections - Clean up instances of printStackTrace

* Shortened - Clean up instances of e.printStackTrace

* SimpleRSS - Clean up instances of e.printStackTrace

* Site - Clean up instances of e.printStackTrace

* sitedescription - Clean up instances of e.printStackTrace

* Taggable - Clean up instances of e.printStackTrace

* Signup - Clean up instances of e.printStackTrace

* Sitemanage - Clean up instances of e.printStackTrace

* Access - Clean up instances of e.printStackTrace

* Admin-tools - Clean up instances of e.printStackTrace

* Announcement - Clean up instances of e.printStackTrace

* Archive - Clean up instances of e.printStackTrace

* Assignment - Clean up instances of e.printStackTrace

* Basiclti - Clean up instances of e.printStackTrace

* Calendar - Clean up instances of e.printStackTrace

* Chat - Clean up instances of e.printStackTrace

* Citations - Clean up instances of e.printStackTrace

* Cloud-content - Clean up instances of e.printStackTrace

* Cmprovider - Clean up instances of e.printStackTrace

* Common - Clean up instances of e.printStackTrace

* Sitestats - Clean up instances of e.printStackTrace

* Commons - Clean up instances of e.printStackTrace

* Content - Clean up instances of e.printStackTrace

* Courier - Clean up instances of e.printStackTrace

* Dav - Clean up instances of e.printStackTrace

* Delegatedaccess - Clean up instances of e.printStackTrace

* Edu-services - Clean up instances of e.printStackTrace

* Content-review - Clean up instances of e.printStackTrace

* Citations - Clean up instances of e.printStackTrace

* Emailtemplateservice - Clean up instances of e.printStackTrace

* Endorsed - Clean up instances of e.printStackTrace

* Entitybroker - Clean up instances of e.printStackTrace

* External-calendaring-service - Clean up instances of e.printStackTrace

* External-calendaring-service - Clean up instances of e.printStackTrace

* Feedback - Clean up instances of e.printStackTrace

* Syllabus - Clean up instances of e.printStackTrace

* Tags - Clean up instances of e.printStackTrace

* Gradebook - Clean up instances of printStackTrace

* Textarea - Clean up printStackTrace

* Tool - Clean up printStackTrace

* Gradebookng - Clean up instances of e.printStackTrace

* Help - Clean up instances of e.printStackTrace

* Hierarchy - Clean up instances of e.printStackTrace

* Jobsscheduler - Clean up instances of e.printStackTrace

* Jsf - Clean up instances of e.printStackTrace

* User - Clean up instances of printStackTrace

* useraudit - Clean up instances of printStack

* usermembership - Clean up instances of printStackTrace

* Velocity - Clean up instances of printStackTrace

* Web - Clean up instances of printStackTrace

* Webservices - Clean up instances of printStackTrace

* Rwiki - Clean up instances of printStackTrace

* rubrics - Clean up instances of printStackTrace

* rsf - Clean up instances of printStackTrace

* roster2 - Clean up instances of printStackTrace

* reset-pass - Clean up instances of printStackTrace

* providers - Clean up instances of printStackTrace

* Profile2 - Clean up instances of printStackTrace

* Kernel - Clean up instances of printStackTrace

* Presence - Clean up instances of printStackTrace

* Postem - Clean up instances of printStackTrace

* Portal - Clean up instances of printStackTrace

* polls - Clean up instances of printStackTrace

* Podcasts - Clean up instances of printStackTrace

* Pasystem - Clean up instances of printStackTrace

* oauth - Clean up instances of printStackTrace

* Lessonbuilder - Clean up instances of printStackTrace

* Login - Clean up instances of printStackTrace

* Mailarchive - Clean up instances of printStackTrace

* Mailsender - Clean up instances of printStackTrace

* Message - Clean up instances of printStackTrace

* MSGCNTR - Clean up instances of printStackTrace

* Extra cases - Clean up instances of printStackTrace

* Extra cases - Clean up instances of System.out.println

* Extra cases - Use Slf4j Annotation

    • -188
    • +184
    ./impl/BasicSqlService.java
  1. … 1309 more files in changeset.
SAK-33544 Problem get CLOB from Database (#4944)

* SAK-33544 Updated BasicSqlService.java

* tabs/spaces

SAK-33544 Problem get CLOB from Database (#4944)

* SAK-33544 Updated BasicSqlService.java

* tabs/spaces

(cherry picked from commit 613a829401a36b2707ac813c73a7124249c51883)

Revert "KNL-1541 - Missing fields initializer for change (#4886)" (#4962)

Revert "KNL-1541 - setUserSecurity should use batched updates (#4886)"

  1. … 4 more files in changeset.
KNL-1550 - SQLService puts strings into preparedstatements as bytes (#4838)

* KNL-1550 - SQLService puts strings into preparedstatements as bytes

* KNL-1550 small refactor

* KNL-1550 - "Fixing" brace style, moving out pos

KNL-1550 - SQLService puts strings into preparedstatements as bytes (#4838)

* KNL-1550 - SQLService puts strings into preparedstatements as bytes

* KNL-1550 small refactor

* KNL-1550 - "Fixing" brace style, moving out pos

(cherry picked from commit 9ba2a348c2ecb4b70b665626e936b934aeb824a7)

KNL-1541 speed up setUserSecurity by using batches (#4810)

* KNL-1541 speed up setUserSecurity by using batches

* KNL-1541 modify dbWriteBatch new method

  1. … 4 more files in changeset.
KNL-1540 write events using prepared statement batching (#4803)

(cherry picked from commit 6366ae7cfe72f617b014e0a2e1b1ff11a7c545fb)

  1. … 3 more files in changeset.
KNL-1540 write events using prepared statement batching (#4803)

  1. … 3 more files in changeset.
KNL-1547 - ClusterEventTracking is leaking database connections (#4796)

* KNL-1547 - ClusterEventTracking is leaking database connections.

* KNL-1547 remove the bad KNL-492 code and return the connection properly

  1. … 1 more file in changeset.
KNL-1547 - ClusterEventTracking is leaking database connections (#4796)

* KNL-1547 - ClusterEventTracking is leaking database connections.

* KNL-1547 remove the bad KNL-492 code and return the connection properly

(cherry picked from commit 1d1ab5b208168b9eeec4e457f52dc4db18000332)

  1. … 1 more file in changeset.
SAK-30828 Normalize logging for 11.x (#3346)

* SAK-30828 Normalize sakai logging

- remove commons-logging (jcl)

- add logging to those projects where it was removed

- convert System.out to log messages in many projects

- add jcl-over-slf4j lib

- update many dependencies to inherit from master

- update logging for tests

- add lombok to global dependency (@Slf4j)

Conflicts:

basiclti/tsugi-util/pom-tsugi.xml

content-review/impl/dao/pom.xml

content-review/impl/turnitin/pom.xml

content-review/pom.xml

entitybroker/utils/pom.xml

gradebookng/tool/src/java/org/sakaiproject/gradebookng/business/util/Temp.java

gradebookng/tool/src/java/org/sakaiproject/gradebookng/tool/pages/BasePage.java

gradebookng/tool/src/java/org/sakaiproject/gradebookng/tool/panels/importExport/CreateGradeItemStep.java

gradebookng/tool/src/java/org/sakaiproject/gradebookng/tool/panels/importExport/GradeImportConfirmationStep.java

gradebookng/tool/src/java/org/sakaiproject/gradebookng/tool/panels/importExport/GradeImportUploadStep.java

gradebookng/tool/src/java/org/sakaiproject/gradebookng/tool/panels/importExport/GradeItemImportSelectionStep.java

* SAK-30828 switch log4j logging to slf4j

* SAK-30828 switch jcl logging to slf4j

Conflicts:

assignment/assignment-impl/impl/src/java/org/sakaiproject/assignment/impl/BaseAssignmentService.java

assignment/assignment-impl/impl/src/java/org/sakaiproject/assignment/impl/DbAssignmentService.java

basiclti/basiclti-impl/src/java/org/sakaiproject/lti/impl/LTIReportingJob.java

content-review/impl/turnitin/src/main/java/org/sakaiproject/contentreview/turnitin/util/TurnitinAPIUtil.java

kernel/kernel-impl/src/main/java/org/sakaiproject/event/impl/BaseLearningResourceStoreService.java

lessonbuilder/tool/src/java/org/sakaiproject/lessonbuildertool/tool/beans/SimplePageBean.java

portal/portal-impl/impl/src/java/org/sakaiproject/portal/charon/handlers/GenerateBugReportHandler.java

samigo/samigo-app/src/java/org/sakaiproject/tool/assessment/ui/listener/evaluation/QuestionScoreListener.java

samigo/samigo-app/src/java/org/sakaiproject/tool/assessment/ui/listener/questionpool/PoolSaveListener.java

signup/impl/src/java/org/sakaiproject/signup/logic/SignupMeetingServiceImpl.java

syllabus/syllabus-impl/src/java/org/sakaiproject/component/app/syllabus/SyllabusServiceImpl.java

* SAK-30828 slf4j-log4j12 binding should be provided

* SAK-30828 Lombok @CommonsLog migrated to @Slf4j

Conflicts:

content-review/impl/dao/src/test/java/org/sakaiproject/contentreview/dao/ContentReviewDaoImplTest.java

content-review/impl/service/src/main/java/org/sakaiproject/contentreview/service/ContentReviewFederatedServiceImpl.java

content-review/impl/service/src/main/java/org/sakaiproject/contentreview/service/ContentReviewQueueServiceImpl.java

content-review/impl/turnitin/src/main/java/org/sakaiproject/contentreview/turnitin/TurnitinAccountConnection.java

content-review/impl/turnitin/src/main/java/org/sakaiproject/contentreview/turnitin/TurnitinContentValidator.java

content-review/impl/turnitin/src/main/java/org/sakaiproject/contentreview/turnitin/TurnitinReviewServiceImpl.java

content-review/impl/turnitin/src/main/java/org/sakaiproject/contentreview/turnitin/TurnitinSessionFuncs.java

content-review/impl/turnitin/src/main/java/org/sakaiproject/contentreview/turnitin/util/TurnitinAPIUtil.java

content-review/impl/vericite/src/main/java/org/sakaiproject/contentreview/vericite/ContentReviewServiceVeriCite.java

* SAK-30828 content-review slf4j conversion

* SAK-31420 Issue with import from site not working due to logger serialization (#3169)

  1. … 1945 more files in changeset.
KNL-1445 Better logging when packet too large. (#2927)

On MySQL if the packet is too large it would just silently fail, this attempts to provide a helpful error when we can guess at what the problem might have been.

KNL-1445 Better logging when packet too large. (#2927)

On MySQL if the packet is too large it would just silently fail, this attempts to provide a helpful error when we can guess at what the problem might have been.

SAK-30828 switch jcl logging to slf4j

  1. … 1492 more files in changeset.
KNL-1401 - Don't log failures during autoddl run

  1. … 2 more files in changeset.
Make BasicSqlService a concrete class.

The dependencies of BasicSqlService aren’t crucial to it’s startup so it

doesn’t need to be abstract class. This makes it easier to test with.

  1. … 1 more file in changeset.
Small javadoc change.

  1. … 2 more files in changeset.
KNL-385 show a warning in the logs if the record already exists instead of silently swallowing the error

git-svn-id: https://source.sakaiproject.org/svn/kernel/trunk@309831 66ffb92e-73f9-0310-93c1-f5514f145a0a

KNL-880 remove db2 and mssql sql scripts and the relevant classes

git-svn-id: https://source.sakaiproject.org/svn/kernel/trunk@106047 66ffb92e-73f9-0310-93c1-f5514f145a0a

    • -29
    • +0
    ./impl/BasicSqlServiceSqlMsSql.java
  1. … 75 more files in changeset.
SAK-21839 replacing dead link to osedu.org with link to opensource.org ECL-2.0

git-svn-id: https://source.sakaiproject.org/svn/kernel/trunk@105077 66ffb92e-73f9-0310-93c1-f5514f145a0a

  1. … 633 more files in changeset.
KNL-433 rollback of previous trunk commit r92476

git-svn-id: https://source.sakaiproject.org/svn/kernel/trunk@97897 66ffb92e-73f9-0310-93c1-f5514f145a0a

KNL-784 use @override correctly

git-svn-id: https://source.sakaiproject.org/svn/kernel/trunk@96596 66ffb92e-73f9-0310-93c1-f5514f145a0a

KNL-775 move to a single interface

git-svn-id: https://source.sakaiproject.org/svn/kernel/trunk@96442 66ffb92e-73f9-0310-93c1-f5514f145a0a

  1. … 2 more files in changeset.